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JAC Advance Access published online on July 21, 2008

Journal of Antimicrobial Chemotherapy, doi:10.1093/jac/dkn300
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© The Author 2008. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please e-mail: journals.permissions@oxfordjournals.org

Research letter

The blaCTX-M-1 gene located in a novel complex class I integron bearing an ISCR1 element in Escherichia coli isolates from Zhenjiang, China

Zhaoliang Su, Xiaoli Dai, Jianguo Chen, Fanzhi Kong, Huifang Wang, Yazhen Li, Sufang Peng, Shengjun Wang, Qixiang Shao, Liwe Lv and Huaxi Xu*

Department of Microbiology and Immunology, Institute of Clinical Laboratory Medicine, Jiangsu University, Zhenjiang 212013, China


* Corresponding author. Tel: +86-511-5038140; Fax: +86-511-5038449; E-mail: xuhx{at}ujs.edu.cn or szl30{at}yeah.net

Key Words: E. coli , unusual class 1 integron , extended-spectrum β-lactamases , ESBLs

Sir,

CTX-M enzymes include more than 60 variants belonging to five different clusters (CTX-M-1, CTX-M-2, CTX-M-8, CTX-M-9 and CTX-M-25) according to their amino acid sequence.1 In recent years, CTX-M enzymes have become the most prevalent extended-spectrum β-lactamases (ESBLs), both in nosocomial and in community settings. Different genetic elements might be involved in the mobilization of blaCTX-M genes, such as insertion sequences (ISs) ISEcp1, IS26 and IS903.1 The blaCTX-M genes have also been associated with ISCR1 (ISs common region 1, previously also called orf513), which is embedded in class 1 integrons.1,2

Class 1 integrons containing ISCR elements are known as complex class 1 integrons. They contain the classic integron structure and a second copy of the 3'CS. Between the two copies of the 3'CS is a 2.1 kb ISCR, as has been identified in In6, In7, In117, In34, In35 and In601,35 followed by a variable region that contains resistance genes, e.g. dfrA10, catII, blaDHA-1 (pSAL-1), blaCTX-M-9 or blaCTX-M-2,5 but never blaCTX-M-1 thus far.

Between 2005 and 2006, a total of 146 Escherichia coli isolates were obtained from the Affiliated People's Hospital of Jiangsu University. ESBL production was detected in 21/146 isolates using the standard double-disc synergy test.6 Eighty-nine of 146 (61%) isolates were found to carry class 1 integrons of different types, and 10 of these carried complex class I integrons according to the PCR analysis. The primers were designed according to the GenBank sequence (GenBank accession numbers AF174129 [GenBank] and AF071413 [GenBank] ). Five of the isolates carrying a complex class 1 integron also produced an ESBL. In these five isolates, a blaCTX-M-1 gene was detected between orf513 and an IS3000 element (Figure 1). The sequence of the complex class I integron bearing a blaCTX-M-1 gene has been submitted to GenBank under accession no. EU687490.


Figure 1
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Figure 1. Schematic representation of the complex integron structures carried by the ESBL-producing isolates. The locations of the primers used are indicated by small arrows.

 
Recently, it has been suggested that ISCR1 elements were members of an extended family of IS91-like elements that can transpose adjacent DNA sequences by a mechanism termed rolling-circle transposition and are responsible for the mobilization of antibiotic resistance genes, including the blaCTX-M genes.7 However, this is the first report of a CTX-M-1 gene found to be associated with an ISCR element. The ISCR element is proposed to provide a powerful mechanism to mobilize antibiotic resistance genes, and, if this is the case, further spread of blaCTX-M-1 can be expected.


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This work was supported by the Foundation of Social Development of Jiangsu Province (grant no. BS2007041).


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None to declare.


    Acknowledgements
 
We thank Chen Qiaolin and Cheng Jing for their technical support.


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1 . Eckert C, Gautier V, Arlet G. DNA sequence analysis of the genetic environment of blaCTX-M genes. J Antimicrob Chemother (2006) 57:14–23.[Abstract/Free Full Text]

2 . Cantón R, Coque TM. The CTX-M β-lactamase pandemic. Curr Opin Microbiol (2006) 9:466–75.[CrossRef][Web of Science][Medline]

3 . Partridge SR, Hall RM. In34, a complex In5 family class 1 integron containing orf513 and dfrA10. Antimicrob Agents Chemother (2003) 47:342–9.[Abstract/Free Full Text]

4 . Valverde A, Cantón R, Galán JC, et al. In117, an unusual In0-like class 1 integron containing CR1 and blaCTX-M-2 and associated with a Tn21-like element. Antimicrob Agents Chemother (2006) 50:799–802.[Abstract/Free Full Text]

5 . Arduino SM, Roy PH, Jacoby GA, et al. blaCTX-M-2 is located in an unusual class 1 integron (In35) which includes Orf513. Antimicrob Agents Chemother (2002) 46:2303–6.[Abstract/Free Full Text]

6 . Jarlier V, Nicolas MH, Fournier G, et al. Extended broad-spectrum β-lactamases conferring transferable resistance to newer β-lactam agents in Enterobacteriaceae: hospital prevalence and susceptibility patterns. Rev Infect Dis (1988) 10:867–78.[Web of Science][Medline]

7 . Toleman MA, Bennett PM, Walsh TR. ISCR elements: novel gene-capturing systems of the 21st century? Microbiol Mol Biol Rev (2006) 70:296–316.[Abstract/Free Full Text]


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This Article
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